Package: BASiNETEntropy
Title: Classification of RNA Sequences using Complex Network and
        Information Theory
Version: 0.99.6
Authors@R: c(
        person("Murilo Montanini", "Breve", 
        email = "murilo_breve@hotmail.com",
        role = "aut",
        comment = c(ORCID = "0000-0002-5781-0480")),
        person("Matheus Henrique", "Pimenta-Zanon", 
        email = "matheus.pimenta@outlook.com",
        role = "aut",
        comment = c(ORCID = "0000-0003-0698-6360")),
        person("Fabricio Martins", "Lopes", 
        email = "fabricio@utfpr.edu.br",
        role = c("aut","cre"),
        comment = c(ORCID = "0000-0002-8786-3313")))
Description: It makes the creation of networks from sequences of RNA,
        with this is done the abstraction of characteristics of these
        networks with a methodology of maximum entropy for the purpose
        of making a classification between the classes of the
        sequences. There are two data present in the 'BASiNET' package,
        "mRNA", and "ncRNA" with 10 sequences. These sequences were
        taken from the data set used in the article (LI, Aimin; ZHANG,
        Junying; ZHOU, Zhongyin, 2014) <doi:10.1186/1471-2105-15-311>,
        these sequences are used to run examples.
License: GPL-3
Encoding: UTF-8
Depends: R (>= 4.1.0)
Imports: igraph, Biostrings, randomForest
biocViews: Software, BiologicalQuestion, GenePrediction,
        FunctionalPrediction, Network, Classification
RoxygenNote: 7.2.0
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2026-10-03 07:29:46 UTC; root
Author: Murilo Montanini Breve [aut]
        (<https://orcid.org/0000-0002-5781-0480>), Matheus Henrique
        Pimenta-Zanon [aut] (<https://orcid.org/0000-0003-0698-6360>),
        Fabricio Martins Lopes [aut, cre]
        (<https://orcid.org/0000-0002-8786-3313>)
Maintainer: Fabricio Martins Lopes <fabricio@utfpr.edu.br>
Config/pak/sysreqs: libglpk-dev libxml2-dev zlib1g-dev
Repository: https://fabriciomlopes.r-universe.dev
Date/Publication: 2023-08-16 19:30:34 UTC
RemoteUrl: https://github.com/cran/BASiNETEntropy
RemoteRef: HEAD
RemoteSha: a9d9de0d2a14b2cd2fb8b5bb50aa7255b839141c